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➞ Registration closed July 15.

BCC2020 is online, global, and affordable. The meeting and training are now done, and the CoFest is under way.

The 2020 Bioinformatics Community Conference brings together the Bioinformatics Open Source Conference (BOSC) and the Galaxy Community Conference into a single event featuring training, a meeting, and a CollaborationFest. Events run from July 17 through July 25, and is held in both the eastern and western hemispheres.

avatar for Chris Daley

Chris Daley

Thursday, July 16
 

11:00 EDT

Pre-BCC Open House! West
 
Friday, July 17
 

12:16 EDT

Scaling genomic analysis with Glow and Apache Spark Training BHenry Davidge • Karen Feng • Rishi Ghose • Michael Shtelma • Frank Nothaft • Kiavash Kianfar • Amir Kermany • Will Brandler
 
Saturday, July 18
 

15:31 EDT

Introduction to Nextflow Training CEvan Floden • Paolo Di Tommaso • Kevin Sayers
 
Sunday, July 19
 

10:00 EDT

BCC2020 Conference Day 1: West Joint

10:01 EDT

Welcome JointDave Clements • Nomi Harris

10:30 EDT

West Keynote 1: How Open Source has Changed the World JointLincoln Stein

11:30 EDT

BOSC West Session 1a: Sequencing & analysis 🍐 BOSCChris Fields

11:31 EDT

Digital Expression Explorer 2: a repository of 8 trillion uniformly processed RNA-seq reads and still counting 🍐 BOSCMark Ziemann

11:45 EDT

Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED 🍐 BOSCSam Kovaka

12:00 EDT

A reproducible workflow for amplicon-based microbial community analysis using the drake R package 🍐 BOSCRodrigo Ortega-Polo

12:05 EDT

SigBio-Shiny: A standalone interactive application for detecting biological significance on a set of genes 🍐 BOSCSangram Keshari Sahu

13:00 EDT

P1-10: : BLAST in a container 🍐 JointTom Madden P5-04: : Magic-BLAST an accurate RNA-seq mapper 🍐 JointGrzegorz Boratyn

15:15 EDT

BoF: Board games Social JointDelphine Lariviere BoF: Where is the bar? JointUla Afgan
 
Monday, July 20
 

11:15 EDT

BOSC West Session 3: Building Open Source Communities (BOSC) 🍐 BOSCYo Yehudi

11:16 EDT

Building open source communities and empowering new contributors 🍐 BOSCYo Yehudi

11:40 EDT

Open Life Science: Empowering early career researchers to become open science leaders 🍐 BOSCBérénice Batut • Yo Yehudi • Malvika Sharan

12:20 EDT

AWS Gold Sponsor Talk: Scalable genomics data analysis in the cloud JointLee Pang

12:40 EDT

Software Sustainability Institute Gold Sponsor Talk: Most code is cr#p and that’s okay JointNeil Chue Hong

13:00 EDT

P3-06: : eSPiGA: a population genomic analyses package with graphical interface 🍐 JointSebastian E. Ramos-Onsins

14:00 EDT

BOSC West Session 4a: Developer tools & libraries 🍐 BOSCKarsten Hokamp

14:15 EDT

SIMD Everywhere: portable implementations of SIMD intrinsics 🍐 BOSCEvan Nemerson

14:20 EDT

Biopython Project Update 2020 🍐 BOSCPeter Cock

14:30 EDT

Introducing App Store for IGB, a site for sharing and installing extensions for Integrated Genome Browser from BioViz.org 🍐 BOSCAnn Loraine
 
Tuesday, July 21
 

10:00 EDT

BOSC West Session 5: Workflow management systems 🍐 BOSCPeter Cock

10:01 EDT

Evolution of the Nextflow workflow management system 🍐 BOSCEvan Floden

10:15 EDT

What’s new with nf-core: community-built bioinformatics pipelines 🍐 BOSCPhil Ewels

10:20 EDT

H3AGWAS: Portable GWAS workflows for African science 🍐 BOSCBrandenburg Jean-Tristan

10:30 EDT

CWL-Airflow: a lightweight pipeline manager supporting Common Workflow Language 🍐 BOSCMichael Kotliar

10:45 EDT

Challenges in implementing Janis: A generator for CWL and WDL pipelines 🍐 BOSCMichael Franklin

10:50 EDT

Rapidly creating portable pipelines with aCLImatise 🍐 BOSCMichael Milton

10:55 EDT

The all-new Genomics Virtual Lab 🍐 BOSCThe Other Enis Afgan

11:30 EDT

P2-03: : COVID-19 PubSeq: Public SARS-CoV-2 Sequence Resource 🍐 JointAndrea Guarracino P3-08: : Evolution of the Nextflow workflow management system 🍐 JointEvan Floden P6-05: : SIMD Everywhere: portable implementations of SIMD intrinsics 🍐 JointEvan Nemerson
 
Wednesday, July 22
 

03:15 EDT

Birds of a Feather (BOFs) Joint

04:15 EDT

CollaborationFest: Core Joint
 
Friday, July 24
 

01:00 EDT

CollaborationFest: Encore Joint
 
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