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➞ Registration closed July 15.

BCC2020 is online, global, and affordable. The meeting and training are now done, and the CoFest is under way.

The 2020 Bioinformatics Community Conference brings together the Bioinformatics Open Source Conference (BOSC) and the Galaxy Community Conference into a single event featuring training, a meeting, and a CollaborationFest. Events run from July 17 through July 25, and is held in both the eastern and western hemispheres.

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Saturday, July 18 • 00:16 - 02:45
Introduction to Galaxy Administration II

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This session is full.

This is the second session of a 3 session workshop. Please sign up for all 3 sessions.

After attending this three-session workshop you will be able to set up, configure, and administer a fairly polished Galaxy instance. Topics include:
  • deployment and platform options
  • using Ansible to install and configure your own server
  • customizing and extending your instance
  • defining and importing genomes, running data managers
  • upgrading to a new Galaxy release
  • configure nginX webserver with Galaxy
  • database overview and best practices
  • running tools in containers
  • users and groups and quotas
  • storage management and using heterogeneous storage services
  • exploring the Galaxy job configuration file
  • connecting Galaxy to compute clusters
  • polishing Galaxy on uWSGI application server
  • instance monitoring using Grafana
  • shared data management with CVMFS
  • when things go wrong: Galaxy server troubleshooting tips & examples

Prerequisites
  • Knowledge and comfort with the Unix/Linux command line interface and a text editor: If you don't know what cd, mv, rm, mkdir, chmod, grep and so on can do then you will struggle
Speakers
avatar for Simon Gladman

Simon Gladman

University of Melbourne
avatar for Kiran K Telukunta

Kiran K Telukunta

TMS Foundation
Done PhD from University of Freiburg in Pharmaceutical Bioinformatics. As part of TMS Foundation and Bioclues promoting Galaxy Opensource frame work in India. Working as Cloud Architect. For a detail profile please visit my linkedin page. Following reasons should encourage you to... Read More →
avatar for Nicholas Rhodes

Nicholas Rhodes

SysAdmin & DBA, Queensland Facility for Advanced Bioinformatics
I have a forty-plus year involvement with life sciences computing. My first encounter with sequences was Dayhoff's "Atlas of Protein Sequence and Structure" - a book that listed all the 65 known protein sequences.
CB

Catherine Bromhead

University of Melbourne

Saturday July 18, 2020 00:16 - 02:45 EDT
Training D
  Training-East

Attendees (28)