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BCC2020 has ended
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➞ Registration closed July 15.

BCC2020 is online, global, and affordable. The meeting and training are now done, and the CoFest is under way.

The 2020 Bioinformatics Community Conference brings together the Bioinformatics Open Source Conference (BOSC) and the Galaxy Community Conference into a single event featuring training, a meeting, and a CollaborationFest. Events run from July 17 through July 25, and is held in both the eastern and western hemispheres.

avatar for Michael Franklin

Michael Franklin

University of Melbourne
Research Software Engineer
Melbourne, Australia
I'm a research software engineer at the University of Melbourne / Peter MacCallum Cancer Centre who's interested in all things pipelines! I develop Janis, a workflow assistant that generates CWL and WDL.

I'm also interested in general programming, specifically web (React) and database-y type stuff (Node / Python / C#).
Saturday, July 18
 

00:16 EDT

Produce a portable germline variant-calling pipeline in CWL and WDL using Janis and GATK I Training EMichael Franklin • Richard Lupat
 
Sunday, July 19
 

22:00 EDT

BCC2020 Conference Day 1: East Joint

22:01 EDT

Welcome JointNomi Harris • Gareth Price

23:30 EDT

BOSC East Session 1a: Sequencing & analysis 🍐 BOSCMoni Muñoz-Torres

23:55 EDT

Please contribute to FASTQE so I don’t have to 🍐 BOSCAndrew Lonsdale
 
Monday, July 20
 

00:15 EDT

A comprehensive benchmarking of WGS-based structural variant callers 🍐 BOSCVaruni Sarwal

01:00 EDT

P4-07: : GVL Demo: from Administrators to End-users 🌀 JointNuwan Goonasekera

02:01 EDT

Bionitio: building better bioinformatics tools with batteries included 🍐 BOSCBernie Pope

02:15 EDT

Integrating refgenie and Galaxy for reference data management: a proposal for IDC 🌀 GalaxyIgnacio Eguinoa

02:20 EDT

Secondary analysis of publicly available omics data across almost 3 million publications 🍐 BOSCNicholas Darci-Maher

02:30 EDT

Implementation of the IEEE-2791-2020 standard (BioCompute Objects) in Galaxy via workflow invocations 🌀 GalaxyCharles Hadley King

12:20 EDT

AWS Gold Sponsor Talk: Scalable genomics data analysis in the cloud JointLee Pang
 
Tuesday, July 21
 

10:45 EDT

Challenges in implementing Janis: A generator for CWL and WDL pipelines 🍐 BOSCMichael Franklin

22:45 EDT

Challenges in implementing Janis: A generator for CWL and WDL pipelines 🍐 BOSCMichael Franklin
 
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